Struct SerKmers 

pub struct SerKmers<K: Hash, SD> { /* private fields */ }

serialize a SerKmers together with its hashed tags and IDs and a config

Implementations

impl<K: Kmer, SD> SerKmers<K, SD>

pub fn new<DI>( kmers: BoomHashMap2<K, Exts, SD>, translator: Translator, config: SummaryConfig, ) -> SerKmers<K, SD>

where SD: SummaryData<DI>,

make a new SerKmers

pub fn serialize<P: AsRef<Path>>(&self, path: P)

where K: Serialize, SD: Serialize,

serialize a SerKmers

pub fn deserialize_from<P: AsRef<Path> + Debug, DI>(path: P) -> SerKmers<K, SD>

where K: DeserializeOwned, SD: DeserializeOwned + SummaryData<DI>,

deserialize a SerKmers

pub fn kmers(&self) -> &BoomHashMap2<K, Exts, SD>

get a reference of the underlying [BoomHashMap2<K, Exts, SD>]

pub fn translator(&self) -> &Translator

get a reference of the underlying translator (hashed tags & IDs)

pub fn config(&self) -> &SummaryConfig

get a reference of the underlying config

pub fn parameters(&self) -> (usize, Summarizers)

get the set parameters (k, summarizer) of the SerKmers

pub fn dissolve(self) -> (BoomHashMap2<K, Exts, SD>, Translator, SummaryConfig)

get the underlying read, hashed tags, hashed labels and config

Trait Implementations

impl<K: Clone + Hash, SD: Clone> Clone for SerKmers<K, SD>

fn clone(&self) -> SerKmers<K, SD>

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl<K: Debug + Hash, SD: Debug> Debug for SerKmers<K, SD>

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<'de, K, SD> Deserialize<'de> for SerKmers<K, SD>

where K: Deserialize<'de> + Hash, SD: Deserialize<'de>,

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl<K, SD> Serialize for SerKmers<K, SD>

where K: Serialize + Hash, SD: Serialize,

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.